Trametes sp.AH28-2漆酶A的诱导合成及其基因5'-端调控区的克隆与分析

Trametes sp．AH28—2漆酶同工酶的合成需要铜离子的存在,较高浓度的Cu^2 有利于漆酶合成。在以葡萄糖为碳源补加0．5mmol／L Cu^2 的培养基中生长时,发酵液漆酶活性为44．3u／L,同时补加4．0mmol／L邻甲苯胺时,漆酶酶活提高到71．0u／L;而在补加Cu^2 和邻甲苯胺的纤维二糖培养基中,酶活上升至2584u／L,为葡萄糖培养基的36．4倍。邻甲苯胺和铜离子诱导产生的漆酶同工酶组分,均为漆酶A(LacA)。竞争性RT—PCR分析表明,漆酶A基因(lacA)转录本的累积伴随有发酵液漆酶活性的增加,邻甲苯胺对lacA的调控发生在转录水平。lacA结构基因长2110bp,含有10个内含子;lacA的cDNA序列为1560bp,编码520aa的漆酶蛋白,其氨基酸序列与其它真菌漆酶具有较高的相似性。采用改进的反向PCR技术,扩增得到的lacA 5’-端调控区长1881bp,分析表明,该区域上分布有1个TATA框、7个CAAT框和多个潜在的顺式作用元件序列位点,包括5个MRE元件、9个CreA结合位点、4个XRE元件、2个STRE元件和7个氮因子调控位点等。这些序列位点的存在部分地对应了菌株摇瓶发酵奈件下lacA的表达规律。     

Determination of urinary vanillactic acid and plasma dihydroxyphenylalanine as markers of non-secreting neuroblastoma by high-performance liquid chromatography with electrochemical detection

An accurate and precise isocratic high-performance liquid chromatographic technique for the analysis of urinary vanillactic acid (VLA) and plasma dihydroxyphenylalanine (DOPA), especially at low concentrations (pmol/l) for VLA and nmol/l for DOPA), is described. The compounds were purified in a single step, (on an anion exchanger for VLA and on aluminium oxide for DOPA), separated by ion-pair reversed-phase liquid chromatography, and detected electrochemically. A single analysis was complete within 18 min. Mean recoveries of 103 and 81% were obtained for VLA and DOPA, respectively, and the limits of detection were 42 and 76 pmol/l, respectively. The mean values of the intra-assay coefficient of variation were 14 and 7.1% for VLA and DOPA, respectively, and the mean values of the inter-assay coefficient of variation were 15.7 and 11.6%, respectively. Modifications of the retention times (between 2 and 42 min) induced by changes in the eluent were determined. Reference values for normal children and children with neuroblastoma or various tumours are given.     

铜绿假单胞菌SOS反应阻遏蛋白LexA的复性及活性研究

目的:对LexA蛋白复性方法进行优化,对复性后的LexA蛋白的生物学活性进行分析。方法:采用含有GSH/GSSG的缓冲液,一步稀释法对变性LexA蛋白进行复性,用镍离子亲合柱及阳离子柱层析法对复性后的LexA蛋白进行纯化,再以Sephadex G-25凝胶柱脱盐,采用非变性聚丙烯酰胺凝胶电泳和RP-HPLC法检测复性效果,Western blot法分析复性前后及经DTT处理后的LexA蛋白的免疫反应性,凝胶滞留电泳试验检测复性LexA蛋白与DNA的特异性结合能力。结果:复性后的LexA蛋白出现单体和多聚体的形式,多聚体是由单条肽链聚合而成。LexA单体和多聚体与兔抗LexA多克隆抗体均有较好的反应性。复性后的LexA蛋白能与SOS盒序列发生特异性结合。     

甲胺磷和乙酰甲胺磷对萼花臂尾轮虫实验种群动态的影响

应用3天种群增长实验方法,在(25±1)℃、无光照、以3.0×106 cells/mL的斜生栅藻为轮虫的食物等条件下,研究了亚致死浓度(0.01、0.1、1.0、10.0、100.0、1000.0和10000.0 µg/L)的甲胺磷和乙酰甲胺磷对萼花臂尾轮虫实验种群动态的影响。结果显示,甲胺磷和乙酰甲胺磷显著地影响萼花臂尾轮虫的种群增长率、混交雌体数与非混交雌体数的比值和混交率。甲胺磷显著地影响萼花臂尾轮虫种群中的带卵雌体数与不带卵雌体数的比值,但乙酰甲胺磷对其无显著的影响。和对照组相比,浓度为100.0 µg/L 的甲胺磷和浓度为1.0－10,000.0 µg/L 的乙酰甲胺磷均使轮虫种群增长率显著增大,而浓度为1000.0 µg/L和10000.0 µg/L的甲胺磷却使之显著减小;1000.0 µg/L 的甲胺磷使轮虫种群中的带卵雌体数与不带卵雌体数的比值显著上升,0.1 µg/L的甲胺磷和10.0－10000.0 µg/L的乙酰甲胺磷均使轮虫种群中的混交雌体数与非混交雌体数的比值显著上升,0.1µg/L 的甲胺磷和10 µg/L的乙酰甲胺磷均使轮虫的混交率显著增大,10.0－0000.0 µg/L 的乙酰甲胺磷使轮虫休眠卵产量显著提高。上述结果表明,亚致死浓度的甲胺磷和乙酰甲胺磷对萼花臂尾轮虫实验种群动态具有显著的影响。     

AllerHunter: A SVM-Pairwise System for Assessment of Allergenicity and Allergic Cross-Reactivity in Proteins

Allergy is a major health problem in industrialized countries. The number of transgenic food crops is growing rapidly creating the need for allergenicity assessment before they are introduced into human food chain. While existing bioinformatic methods have achieved good accuracies for highly conserved sequences, the discrimination of allergens and non-allergens from allergen-like non-allergen sequences remains difficult. We describe AllerHunter, a web-based computational system for the assessment of potential allergenicity and allergic cross-reactivity in proteins. It combines an iterative pairwise sequence similarity encoding scheme with SVM as the discriminating engine. The pairwise vectorization framework allows the system to model essential features in allergens that are involved in cross-reactivity, but not limited to distinct sets of physicochemical properties. The system was rigorously trained and tested using 1,356 known allergen and 13,449 putative non-allergen sequences. Extensive testing was performed for validation of the prediction models. The system is effective for distinguishing allergens and non-allergens from allergen-like non-allergen sequences. Testing results showed that AllerHunter, with a sensitivity of 83.4% and specificity of 96.4% (accuracy = 95.3%, area under the receiver operating characteristic curve AROC = 0.928±0.004 and Matthew''s correlation coefficient MCC = 0.738), performs significantly better than a number of existing methods using an independent dataset of 1443 protein sequences. AllerHunter is available at http://tiger.dbs.nus.edu.sg/AllerHunter     

Bietti crystalline corneoretinal dystrophy is caused by mutations in the novel gene CYP4V2

Bietti crystalline corneoretinal dystrophy (BCD) is an autosomal recessive retinal dystrophy characterized by multiple glistening intraretinal crystals scattered over the fundus, a characteristic degeneration of the retina, and sclerosis of the choroidal vessels, ultimately resulting in progressive night blindness and constriction of the visual field. The BCD region of chromosome 4q35.1 was refined to an interval flanked centromerically by D4S2924 by linkage and haplotype analysis; mutations were found in the novel CYP450 family member CYP4V2 in 23 of 25 unrelated patients with BCD tested. The CYP4V2 gene, transcribed from 11 exons spanning 19 kb, is expressed widely. Homology to other CYP450 proteins suggests that CYP4V2 may have a role in fatty acid and steroid metabolism, consistent with biochemical studies of patients with BCD.     

SD大鼠原代胰岛细胞分离、纯化及培养技术的改进

目的:探讨大鼠胰岛细胞分离、纯化及培养的方法,并评价其生物学功能。方法:选用8~10周龄健康SD大鼠,采用胆总管逆行注射预冷胶原酶P溶液,37℃水浴静止消化,30目不锈钢筛网过滤,Ficoll400非连续密度梯度离心纯化。分离后的胰岛用DTZ染色计算胰岛产量,胰岛素释放试验评价其生物学功能。结果:胰岛细胞分布于Ficoll400浓度为23%~20%和20%~11%的界面之间。DTZ染色呈红色细胞团,胰岛产量为(606±56)IEQ/胰腺。纯度高达80~90%,活率≥90%,胰岛素释放功能良好。结论:胶原酶P溶液原位消化,Ficoll400纯化是一种高效简便的胰岛分离方法,分离的胰岛细胞数量多、纯度高及活性好。     

3种植物生长调节剂对树头菜扦插生根的影响

利用植物生长调节剂不同种类及质量浓度处理树头菜插穗,了解其扦插生根机制并筛选出适宜扦插繁殖的生长调节剂及浓度配比,为其扩大繁殖和生产提供科学依据。以树头菜一年生枝条为材料,采用3种植物生长调节剂（IAA、NAA、ABT-1）的3种不同质量浓度进行正交试验,清水处理（CK）作为对照,扦插3个月后对其芽生长量及生根性状（生根率、生根量、最长根长、平均根长等）进行测定并综合分析。本次试验筛选出的树头菜扦插最优方案为A1B2C2,即ABT-1质量浓度为50 mg·L^-1、NAA质量浓度为200 mg·L^-1、IAA质量浓度为200 mg·L^-1,该处理生根率（83.33%）、平均根长（24.03 mm）、最长根长（46.13 mm）、平均根数（24条）、根系效果指数（19.06）为CK的2.27、2.97、3.03、4.50、12.79倍,根系发育较好。不同植物生长调节剂在适宜的浓度下混合利用可以显著增加树头菜的生根能力,进而加快生长并提高其扦插生根率。